@Jan > Can you try deleting the track from your USB device, re-analysing within rekordbox and then export and try again? I want to make sure this is, in fact, an issue with the XDJ-1000MK2 (which I don't have on hand to test with, but every other device I have loaded properly with the beat @ 0:00.519).
If you can confirm that after testing, I can escalate this to our product team.