The answer is yes and no.
The "no" is that the DJS-1000 doesn't work directly with rekordbox in performance mode, which is required for the DDJ-200.
The "yes' is that you could use the Ableton Link feature to synchronize the signal outbound from rekordbox through a 3rd party application (I use the Link-to-MIDI app on my iPhone), and connect a USB cable from the DJS-1000 to your iOS device with USB camera kit, or from the DJS to your computer (other apps can do this too, eg. Ableton), and then set the DJS to sync to MIDI over USB.
It's a bit complex, but unfortunately the necessary work-around for the time being.