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Nope, the rotary selector isn't specific to a deck, it simply browses through the collection. Pressing the selector moves back through the window areas. The load buttons are specific to the deck.
I'm not familiar with the part numbers, so I'm not sure what you're asking for in terms of the vinyl mode control; as you note, there is no function on the RB to control that, but you could remap another function. I don't frequently change my effects, so I changed SHIFT+FX ON (SELECT) to be the vinyl control for each deck.