I use vinyl to scratch a lot and has been amazing. Scratching has not been as fun, but on the DDJ-100 i have works very well and the latency is low enough that I have had no issues both mechanically or software wise with scratching. They can take a fair amount of force on the jog-wheel and no damage happens. I have used other controllers (other brands) to scratch and had issue where the jog wheel breaks or stops working entirely. Pioneer make their equipment very rugged and you shouldn't have any issues.
With regards to how you set your jog adjust, play around with it. You might need to get them serviced as there might be dust or dirt underneath causing issues. Take it to a repair place that is authorized.